Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Gm4986-201ENSMUST00000119731 549 ntBASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Gm12502-201ENSMUST00000120197 444 ntBASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Gm45930-201ENSMUST00000221330 292 ntBASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh19Q80TF3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gm15370-201ENSMUST00000117158 253 ntBASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gm19087-201ENSMUST00000191430 946 ntBASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gm7046-201ENSMUST00000221351 977 ntBASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms