Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim46Q7TNM2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim46Q7TNM2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Trim46Q7TNM2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim46Q7TNM2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Trim46Q7TNM2 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.15□□□□□ -0.46
Trim46Q7TNM2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim46Q7TNM2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim46Q7TNM2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim46Q7TNM2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.15□□□□□ -0.47
Trim46Q7TNM2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim46Q7TNM2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.15□□□□□ -0.47
Trim46Q7TNM2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trim46Q7TNM2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim46Q7TNM2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim46Q7TNM2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Gm12439-201ENSMUST00000117162 365 ntBASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Gm15806-201ENSMUST00000120696 955 ntBASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Gm27892-201ENSMUST00000185017 106 ntBASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Gm5356-201ENSMUST00000093326 615 ntBASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim46Q7TNM2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gm8805-201ENSMUST00000117848 313 ntBASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gm12490-201ENSMUST00000120255 560 ntBASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.13□□□□□ -0.47
Trim46Q7TNM2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim46Q7TNM2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim46Q7TNM2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim46Q7TNM2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim46Q7TNM2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim46Q7TNM2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim46Q7TNM2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim46Q7TNM2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim46Q7TNM2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim46Q7TNM2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms