Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtl1Q7M732 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtl1Q7M732 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC22.67■■□□□ 1.22
Rtl1Q7M732 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC22.67■■□□□ 1.22
Rtl1Q7M732 Gm5869-201ENSMUST00000200248 1257 ntBASIC22.67■■□□□ 1.22
Rtl1Q7M732 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC22.67■■□□□ 1.22
Rtl1Q7M732 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Rtl1Q7M732 AC113441.2-201ENSMUST00000221538 1468 ntBASIC22.67■■□□□ 1.22
Rtl1Q7M732 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtl1Q7M732 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtl1Q7M732 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtl1Q7M732 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtl1Q7M732 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rtl1Q7M732 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC22.66■■□□□ 1.22
Rtl1Q7M732 AC123665.1-201ENSMUST00000228204 438 ntBASIC22.66■■□□□ 1.22
Rtl1Q7M732 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtl1Q7M732 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Gm7857-201ENSMUST00000117957 358 ntBASIC22.65■■□□□ 1.22
Rtl1Q7M732 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC22.65■■□□□ 1.22
Rtl1Q7M732 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Rtl1Q7M732 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Mir6927-201ENSMUST00000184494 71 ntBASIC22.65■■□□□ 1.22
Rtl1Q7M732 Rprl1-202ENSMUST00000198476 238 ntBASIC22.65■■□□□ 1.22
Rtl1Q7M732 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC22.65■■□□□ 1.22
Rtl1Q7M732 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Adra1a-206ENSMUST00000225182 2337 ntBASIC22.65■■□□□ 1.22
Rtl1Q7M732 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtl1Q7M732 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rtl1Q7M732 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Rtl1Q7M732 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rtl1Q7M732 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Rtl1Q7M732 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rtl1Q7M732 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rtl1Q7M732 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Gm44262-201ENSMUST00000204969 372 ntBASIC22.64■■□□□ 1.21
Rtl1Q7M732 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC22.64■■□□□ 1.21
Rtl1Q7M732 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Gm28323-201ENSMUST00000186817 2499 ntBASIC22.64■■□□□ 1.21
Rtl1Q7M732 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rtl1Q7M732 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Gm6963-201ENSMUST00000147879 379 ntBASIC22.63■■□□□ 1.21
Rtl1Q7M732 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Gm10782-202ENSMUST00000223775 1480 ntBASIC22.63■■□□□ 1.21
Rtl1Q7M732 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtl1Q7M732 Gm7114-201ENSMUST00000190159 1789 ntBASIC22.63■■□□□ 1.21
Rtl1Q7M732 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms