Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc88cQ6VGS5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Gm13813-201ENSMUST00000120998 787 ntBASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Gm21769-201ENSMUST00000211922 111 ntBASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc88cQ6VGS5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Gm37489-201ENSMUST00000191883 159 ntBASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Cts7-204ENSMUST00000225321 1257 ntBASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Gm9083-201ENSMUST00000120423 819 ntBASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Gm11597-201ENSMUST00000121423 964 ntBASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc88cQ6VGS5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Mospd4-201ENSMUST00000180618 576 ntBASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Gm26956-201ENSMUST00000182176 986 ntBASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc88cQ6VGS5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms