Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm26013-201ENSMUST00000104404 119 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm35713-201ENSMUST00000210516 199 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm2875-201ENSMUST00000211333 360 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm23675-201ENSMUST00000157311 125 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.88□□□□□ -0.67
Rif1Q6PR54 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rif1Q6PR54 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.87□□□□□ -0.67
Rif1Q6PR54 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.87□□□□□ -0.67
Rif1Q6PR54 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm12058-201ENSMUST00000118614 437 ntBASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm270-201ENSMUST00000223010 976 ntBASIC10.87□□□□□ -0.67
Rif1Q6PR54 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.87□□□□□ -0.67
Rif1Q6PR54 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm25043-201ENSMUST00000158604 212 ntBASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.87□□□□□ -0.67
Rif1Q6PR54 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms