Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm11331-201ENSMUST00000119764 288 ntBASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm27530-201ENSMUST00000184096 98 ntBASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 AU022133-201ENSMUST00000200601 873 ntBASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Gm5455-201ENSMUST00000058710 715 ntBASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup98Q6PFD9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm13045-201ENSMUST00000119019 712 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm29615-201ENSMUST00000185371 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm28224-201ENSMUST00000186078 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm29001-201ENSMUST00000186177 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm28292-201ENSMUST00000186593 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm28101-201ENSMUST00000187608 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm29076-201ENSMUST00000187689 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm28302-201ENSMUST00000187931 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm28646-201ENSMUST00000188220 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm28205-201ENSMUST00000189177 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm29032-201ENSMUST00000189797 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm28695-201ENSMUST00000190300 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm37448-201ENSMUST00000192795 697 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm18730-201ENSMUST00000218038 343 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup98Q6PFD9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Gm18304-201ENSMUST00000189162 546 ntBASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Gm8959-201ENSMUST00000213150 571 ntBASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup98Q6PFD9 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms