Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm43818-201ENSMUST00000200605 466 ntBASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Smarcc2Q6PDG5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.05■□□□□ 0
Smarcc2Q6PDG5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcc2Q6PDG5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.05■□□□□ 0
Smarcc2Q6PDG5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcc2Q6PDG5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Smarcc2Q6PDG5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.05■□□□□ 0
Smarcc2Q6PDG5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcc2Q6PDG5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcc2Q6PDG5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Gm13369-201ENSMUST00000119442 987 ntBASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Gm14660-201ENSMUST00000119809 575 ntBASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 AY702102-202ENSMUST00000194651 1173 ntBASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Gm37922-201ENSMUST00000195596 455 ntBASIC15.05■□□□□ -0
Smarcc2Q6PDG5 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.05■□□□□ -0
Smarcc2Q6PDG5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcc2Q6PDG5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.04■□□□□ -0
Smarcc2Q6PDG5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Gm16177-201ENSMUST00000120728 718 ntBASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Gm13123-201ENSMUST00000122173 492 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms