Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Gm6023-201ENSMUST00000118217 606 ntBASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Gm12241-201ENSMUST00000118330 726 ntBASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Gm38241-201ENSMUST00000192641 898 ntBASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Gm43758-201ENSMUST00000199500 367 ntBASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb4Q6P8W9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.52□□□□□ -0.24
Hmgb4Q6P8W9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb4Q6P8W9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb4Q6P8W9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb4Q6P8W9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb4Q6P8W9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb4Q6P8W9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Gm15370-201ENSMUST00000117158 253 ntBASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Gm11591-201ENSMUST00000120063 702 ntBASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb4Q6P8W9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms