Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Mir686-201ENSMUST00000102174 109 ntBASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Gm19220-201ENSMUST00000222682 803 ntBASIC14.26□□□□□ -0.13
Krt39Q6IFX4 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt39Q6IFX4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.25□□□□□ -0.13
Krt39Q6IFX4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.25□□□□□ -0.13
Krt39Q6IFX4 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt39Q6IFX4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Gm12341-201ENSMUST00000119724 503 ntBASIC14.24□□□□□ -0.13
Krt39Q6IFX4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Gm37917-201ENSMUST00000194711 392 ntBASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt39Q6IFX4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt39Q6IFX4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms