Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
AtmQ62388 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
AtmQ62388 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
AtmQ62388 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
AtmQ62388 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.89□□□□□ -0.51
AtmQ62388 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.89□□□□□ -0.51
AtmQ62388 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.89□□□□□ -0.51
AtmQ62388 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.89□□□□□ -0.51
AtmQ62388 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Gm18201-201ENSMUST00000174735 875 ntBASIC11.89□□□□□ -0.51
AtmQ62388 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Gm42511-201ENSMUST00000196160 234 ntBASIC11.89□□□□□ -0.51
AtmQ62388 Gm42937-201ENSMUST00000197360 752 ntBASIC11.89□□□□□ -0.51
AtmQ62388 Gm43962-201ENSMUST00000203898 190 ntBASIC11.89□□□□□ -0.51
AtmQ62388 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.89□□□□□ -0.51
AtmQ62388 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.89□□□□□ -0.51
AtmQ62388 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.89□□□□□ -0.51
AtmQ62388 Gm18463-201ENSMUST00000207258 474 ntBASIC11.89□□□□□ -0.51
AtmQ62388 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
AtmQ62388 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.89□□□□□ -0.51
AtmQ62388 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
AtmQ62388 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
AtmQ62388 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
AtmQ62388 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
AtmQ62388 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.88□□□□□ -0.51
AtmQ62388 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.88□□□□□ -0.51
AtmQ62388 Gm7851-201ENSMUST00000117574 323 ntBASIC11.88□□□□□ -0.51
AtmQ62388 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.88□□□□□ -0.51
AtmQ62388 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.88□□□□□ -0.51
AtmQ62388 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.88□□□□□ -0.51
AtmQ62388 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.88□□□□□ -0.51
AtmQ62388 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.88□□□□□ -0.51
AtmQ62388 Ighv1-86-201ENSMUST00000200562 353 ntBASIC11.88□□□□□ -0.51
AtmQ62388 Gm8768-201ENSMUST00000220020 826 ntBASIC11.88□□□□□ -0.51
AtmQ62388 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
AtmQ62388 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Gm12501-201ENSMUST00000119163 529 ntBASIC11.88□□□□□ -0.51
AtmQ62388 Gm25998-201ENSMUST00000175397 53 ntBASIC11.88□□□□□ -0.51
AtmQ62388 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.88□□□□□ -0.51
AtmQ62388 Gm807-202ENSMUST00000224929 408 ntBASIC11.88□□□□□ -0.51
AtmQ62388 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
AtmQ62388 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
AtmQ62388 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.88□□□□□ -0.51
AtmQ62388 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
AtmQ62388 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.88□□□□□ -0.51
AtmQ62388 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.88□□□□□ -0.51
AtmQ62388 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
AtmQ62388 Gm4654-201ENSMUST00000183305 982 ntBASIC11.88□□□□□ -0.51
AtmQ62388 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.88□□□□□ -0.51
AtmQ62388 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.88□□□□□ -0.51
AtmQ62388 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AtmQ62388 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.87□□□□□ -0.51
AtmQ62388 Gm14034-201ENSMUST00000120147 551 ntBASIC11.87□□□□□ -0.51
AtmQ62388 Gm18059-201ENSMUST00000208073 580 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms