Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Gm24526-201ENSMUST00000082921 158 ntBASIC13.43□□□□□ -0.26
Smarcd1Q61466 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.43□□□□□ -0.26
Smarcd1Q61466 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd1Q61466 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.42□□□□□ -0.26
Smarcd1Q61466 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Mospd4-201ENSMUST00000180618 576 ntBASIC13.42□□□□□ -0.26
Smarcd1Q61466 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Gm38092-201ENSMUST00000195600 653 ntBASIC13.42□□□□□ -0.26
Smarcd1Q61466 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Gm5904-201ENSMUST00000210286 865 ntBASIC13.42□□□□□ -0.26
Smarcd1Q61466 Gm18935-201ENSMUST00000212692 664 ntBASIC13.42□□□□□ -0.26
Smarcd1Q61466 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.42□□□□□ -0.26
Smarcd1Q61466 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Smarcd1Q61466 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gm43179-201ENSMUST00000198797 275 ntBASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gm45930-201ENSMUST00000221330 292 ntBASIC13.41□□□□□ -0.26
Smarcd1Q61466 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.41□□□□□ -0.26
Smarcd1Q61466 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd1Q61466 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd1Q61466 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms