Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ift88Q61371 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ift88Q61371 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.26□□□□□ -0.13
Ift88Q61371 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.26□□□□□ -0.13
Ift88Q61371 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.26□□□□□ -0.13
Ift88Q61371 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.26□□□□□ -0.13
Ift88Q61371 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.26□□□□□ -0.13
Ift88Q61371 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.26□□□□□ -0.13
Ift88Q61371 Gm6218-201ENSMUST00000219812 628 ntBASIC14.26□□□□□ -0.13
Ift88Q61371 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.26□□□□□ -0.13
Ift88Q61371 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.26□□□□□ -0.13
Ift88Q61371 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ift88Q61371 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.26□□□□□ -0.13
Ift88Q61371 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ift88Q61371 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Gm5687-201ENSMUST00000118252 640 ntBASIC14.25□□□□□ -0.13
Ift88Q61371 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ift88Q61371 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.25□□□□□ -0.13
Ift88Q61371 Gm16215-201ENSMUST00000161990 637 ntBASIC14.25□□□□□ -0.13
Ift88Q61371 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.25□□□□□ -0.13
Ift88Q61371 Mir7023-201ENSMUST00000185093 64 ntBASIC14.25□□□□□ -0.13
Ift88Q61371 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.25□□□□□ -0.13
Ift88Q61371 Gm44069-201ENSMUST00000204898 506 ntBASIC14.25□□□□□ -0.13
Ift88Q61371 Gm20949-201ENSMUST00000206478 952 ntBASIC14.25□□□□□ -0.13
Ift88Q61371 Gm6458-201ENSMUST00000211573 635 ntBASIC14.25□□□□□ -0.13
Ift88Q61371 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ift88Q61371 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ift88Q61371 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.25□□□□□ -0.13
Ift88Q61371 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ift88Q61371 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.25□□□□□ -0.13
Ift88Q61371 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ift88Q61371 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.24□□□□□ -0.13
Ift88Q61371 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.24□□□□□ -0.13
Ift88Q61371 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.24□□□□□ -0.13
Ift88Q61371 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ift88Q61371 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Ift88Q61371 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.24□□□□□ -0.13
Ift88Q61371 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.24□□□□□ -0.13
Ift88Q61371 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.24□□□□□ -0.13
Ift88Q61371 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.24□□□□□ -0.13
Ift88Q61371 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms