Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cln3Q61124 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cln3Q61124 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Cln3Q61124 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cln3Q61124 Gm11597-201ENSMUST00000121423 964 ntBASIC14.09□□□□□ -0.15
Cln3Q61124 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Gm5523-201ENSMUST00000180415 997 ntBASIC14.09□□□□□ -0.15
Cln3Q61124 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Cln3Q61124 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.09□□□□□ -0.15
Cln3Q61124 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cln3Q61124 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.09□□□□□ -0.15
Cln3Q61124 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cln3Q61124 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Cln3Q61124 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.08□□□□□ -0.15
Cln3Q61124 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.08□□□□□ -0.15
Cln3Q61124 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.08□□□□□ -0.15
Cln3Q61124 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cln3Q61124 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Cln3Q61124 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.08□□□□□ -0.16
Cln3Q61124 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Cln3Q61124 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.08□□□□□ -0.16
Cln3Q61124 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.08□□□□□ -0.16
Cln3Q61124 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.08□□□□□ -0.16
Cln3Q61124 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.08□□□□□ -0.16
Cln3Q61124 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.08□□□□□ -0.16
Cln3Q61124 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cln3Q61124 Gm28882-201ENSMUST00000185504 314 ntBASIC14.08□□□□□ -0.16
Cln3Q61124 Gm37666-201ENSMUST00000194110 866 ntBASIC14.08□□□□□ -0.16
Cln3Q61124 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cln3Q61124 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cln3Q61124 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Cln3Q61124 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cln3Q61124 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.07□□□□□ -0.16
Cln3Q61124 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.07□□□□□ -0.16
Cln3Q61124 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Cln3Q61124 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.07□□□□□ -0.16
Cln3Q61124 Gm12015-201ENSMUST00000117065 843 ntBASIC14.07□□□□□ -0.16
Cln3Q61124 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.07□□□□□ -0.16
Cln3Q61124 Gm13813-201ENSMUST00000120998 787 ntBASIC14.07□□□□□ -0.16
Cln3Q61124 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.07□□□□□ -0.16
Cln3Q61124 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cln3Q61124 Gm24514-201ENSMUST00000174961 285 ntBASIC14.07□□□□□ -0.16
Cln3Q61124 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.07□□□□□ -0.16
Cln3Q61124 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.07□□□□□ -0.16
Cln3Q61124 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.07□□□□□ -0.16
Cln3Q61124 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.07□□□□□ -0.16
Cln3Q61124 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cln3Q61124 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.07□□□□□ -0.16
Cln3Q61124 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms