Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col12a1Q60847 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.4□□□□□ -0.42
Col12a1Q60847 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.4□□□□□ -0.42
Col12a1Q60847 Gm19009-201ENSMUST00000223072 823 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Col12a1Q60847 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Col12a1Q60847 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Col12a1Q60847 Gm22711-201ENSMUST00000116890 133 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Rprl1-201ENSMUST00000158050 327 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 Gm23045-201ENSMUST00000175041 96 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Gm9645-201ENSMUST00000197131 792 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.4□□□□□ -0.42
Col12a1Q60847 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col12a1Q60847 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col12a1Q60847 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.4□□□□□ -0.42
Col12a1Q60847 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.4□□□□□ -0.43
Col12a1Q60847 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col12a1Q60847 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col12a1Q60847 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col12a1Q60847 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col12a1Q60847 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.4□□□□□ -0.43
Col12a1Q60847 Gm14034-201ENSMUST00000120147 551 ntBASIC12.4□□□□□ -0.43
Col12a1Q60847 Gm12030-201ENSMUST00000121917 223 ntBASIC12.4□□□□□ -0.43
Col12a1Q60847 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.4□□□□□ -0.43
Col12a1Q60847 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col12a1Q60847 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.4□□□□□ -0.43
Col12a1Q60847 Gm17877-201ENSMUST00000192578 814 ntBASIC12.4□□□□□ -0.43
Col12a1Q60847 Gm5298-201ENSMUST00000201122 892 ntBASIC12.4□□□□□ -0.43
Col12a1Q60847 Gm26448-201ENSMUST00000082446 203 ntBASIC12.4□□□□□ -0.43
Col12a1Q60847 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.39□□□□□ -0.43
Col12a1Q60847 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.39□□□□□ -0.43
Col12a1Q60847 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Gm24844-201ENSMUST00000158679 127 ntBASIC12.39□□□□□ -0.43
Col12a1Q60847 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Gm2875-201ENSMUST00000211333 360 ntBASIC12.39□□□□□ -0.43
Col12a1Q60847 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Col12a1Q60847 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Matn2-206ENSMUST00000228570 2798 ntBASIC12.39□□□□□ -0.43
Col12a1Q60847 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Gm20414-201ENSMUST00000172918 646 ntBASIC12.39□□□□□ -0.43
Col12a1Q60847 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.39□□□□□ -0.43
Col12a1Q60847 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col12a1Q60847 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Col12a1Q60847 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col12a1Q60847 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Gm42433-201ENSMUST00000196806 940 ntBASIC12.38□□□□□ -0.43
Col12a1Q60847 Gm6855-201ENSMUST00000206307 790 ntBASIC12.38□□□□□ -0.43
Col12a1Q60847 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.38□□□□□ -0.43
Col12a1Q60847 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms