Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.73□□□□□ -0.21
Shroom1Q5SX79 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Gm11222-201ENSMUST00000119005 738 ntBASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Gm27320-201ENSMUST00000184892 109 ntBASIC13.72□□□□□ -0.21
Shroom1Q5SX79 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.72□□□□□ -0.21
Shroom1Q5SX79 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shroom1Q5SX79 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Gm11964-201ENSMUST00000120982 444 ntBASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Gm14381-201ENSMUST00000122105 414 ntBASIC13.71□□□□□ -0.21
Shroom1Q5SX79 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms