Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc88aQ5SNZ0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm11531-201ENSMUST00000117614 555 ntBASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm16296-201ENSMUST00000159905 325 ntBASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm44405-201ENSMUST00000198952 126 ntBASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc88aQ5SNZ0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm43058-201ENSMUST00000197645 625 ntBASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm45118-201ENSMUST00000208928 825 ntBASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm5950-201ENSMUST00000213337 772 ntBASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ccdc88aQ5SNZ0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms