Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Gm11246-201ENSMUST00000120880 345 ntBASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Gm23596-201ENSMUST00000104304 132 ntBASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Gm11956-201ENSMUST00000119525 512 ntBASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Gm11836-201ENSMUST00000121022 441 ntBASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps13aQ5H8C4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Gm11989-201ENSMUST00000117240 672 ntBASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Gm11362-201ENSMUST00000118838 850 ntBASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Gm16296-201ENSMUST00000159905 325 ntBASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Rprl1-201ENSMUST00000158050 327 ntBASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.43□□□□□ -0.42
Vps13aQ5H8C4 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Gm12030-201ENSMUST00000121917 223 ntBASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Gm9230-201ENSMUST00000188228 532 ntBASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Gm6855-201ENSMUST00000206307 790 ntBASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps13aQ5H8C4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms