Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.77□□□□□ -0.37
Scn2bQ56A07 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn2bQ56A07 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.76□□□□□ -0.37
Scn2bQ56A07 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.76□□□□□ -0.37
Scn2bQ56A07 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.76□□□□□ -0.37
Scn2bQ56A07 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm45384-201ENSMUST00000210451 277 ntBASIC12.76□□□□□ -0.37
Scn2bQ56A07 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn2bQ56A07 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Gm15429-201ENSMUST00000151268 798 ntBASIC12.75□□□□□ -0.37
Scn2bQ56A07 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.75□□□□□ -0.37
Scn2bQ56A07 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.75□□□□□ -0.37
Scn2bQ56A07 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.75□□□□□ -0.37
Scn2bQ56A07 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.75□□□□□ -0.37
Scn2bQ56A07 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.75□□□□□ -0.37
Scn2bQ56A07 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn2bQ56A07 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms