Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm8885-201ENSMUST00000189382 598 ntBASIC15.04■□□□□ -0
Ddx49Q4FZF3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.04■□□□□ -0
Ddx49Q4FZF3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.03■□□□□ -0
Ddx49Q4FZF3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Gm9083-201ENSMUST00000120423 819 ntBASIC15.03■□□□□ -0
Ddx49Q4FZF3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.03■□□□□ -0
Ddx49Q4FZF3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.03■□□□□ -0
Ddx49Q4FZF3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.03■□□□□ -0
Ddx49Q4FZF3 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.03■□□□□ -0
Ddx49Q4FZF3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx49Q4FZF3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx49Q4FZF3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Gm14109-201ENSMUST00000118814 309 ntBASIC15.02■□□□□ -0
Ddx49Q4FZF3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Gm25700-201ENSMUST00000177693 110 ntBASIC15.02■□□□□ -0
Ddx49Q4FZF3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.02■□□□□ -0
Ddx49Q4FZF3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.02■□□□□ -0
Ddx49Q4FZF3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.02■□□□□ -0
Ddx49Q4FZF3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx49Q4FZF3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ddx49Q4FZF3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx49Q4FZF3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx49Q4FZF3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx49Q4FZF3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx49Q4FZF3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx49Q4FZF3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx49Q4FZF3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ddx49Q4FZF3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx49Q4FZF3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.02□□□□□ -0.01
Ddx49Q4FZF3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Gm43378-201ENSMUST00000199336 582 ntBASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms