Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Gm16202-201ENSMUST00000117532 544 ntBASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Gm18187-201ENSMUST00000196476 984 ntBASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.71□□□□□ -0.21
Syne3Q4FZC9 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Syne3Q4FZC9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Syne3Q4FZC9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Syne3Q4FZC9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syne3Q4FZC9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syne3Q4FZC9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syne3Q4FZC9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Syne3Q4FZC9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Syne3Q4FZC9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Gm8652-201ENSMUST00000181363 964 ntBASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Gm27847-201ENSMUST00000183711 107 ntBASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Gm27375-201ENSMUST00000183799 107 ntBASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Syne3Q4FZC9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Gm8213-201ENSMUST00000118191 441 ntBASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.69□□□□□ -0.22
Syne3Q4FZC9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms