Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Trim80Q3V061 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim80Q3V061 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trim80Q3V061 Gm12585-201ENSMUST00000117307 290 ntBASIC13.37□□□□□ -0.27
Trim80Q3V061 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim80Q3V061 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim80Q3V061 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim80Q3V061 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Gm9002-201ENSMUST00000178437 499 ntBASIC13.37□□□□□ -0.27
Trim80Q3V061 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim80Q3V061 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.37□□□□□ -0.27
Trim80Q3V061 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.37□□□□□ -0.27
Trim80Q3V061 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim80Q3V061 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim80Q3V061 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.37□□□□□ -0.27
Trim80Q3V061 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim80Q3V061 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.36□□□□□ -0.27
Trim80Q3V061 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim80Q3V061 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim80Q3V061 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.36□□□□□ -0.27
Trim80Q3V061 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Gm10766-202ENSMUST00000194123 606 ntBASIC13.35□□□□□ -0.27
Trim80Q3V061 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms