Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Upf3bQ3ULL6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upf3bQ3ULL6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upf3bQ3ULL6 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.82□□□□□ -0.2
Upf3bQ3ULL6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upf3bQ3ULL6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upf3bQ3ULL6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm12384-201ENSMUST00000119228 919 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm11425-201ENSMUST00000119608 498 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm17208-201ENSMUST00000168388 535 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm7029-201ENSMUST00000173226 450 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm26927-201ENSMUST00000182385 965 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm27682-201ENSMUST00000183930 110 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm27731-201ENSMUST00000185192 107 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm37042-201ENSMUST00000193816 581 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm19163-201ENSMUST00000223313 780 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm9396-201ENSMUST00000076703 567 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upf3bQ3ULL6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Gm45784-201ENSMUST00000188360 142 ntBASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Gm4768-201ENSMUST00000206199 686 ntBASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.8□□□□□ -0.2
Upf3bQ3ULL6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms