Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Gm13492-201ENSMUST00000119772 665 ntBASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Gm13316-201ENSMUST00000140537 691 ntBASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Gm6007-201ENSMUST00000208170 823 ntBASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-3Q3UHX8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Mir8109-201ENSMUST00000184375 117 ntBASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 Daam2-202ENSMUST00000224595 1926 ntBASIC12.15□□□□□ -0.46
Nkx6-3Q3UHX8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx6-3Q3UHX8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx6-3Q3UHX8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-3Q3UHX8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms