Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC8.81□□□□□ -1
Cops9Q3U898 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC8.81□□□□□ -1
Cops9Q3U898 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC8.81□□□□□ -1
Cops9Q3U898 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cops9Q3U898 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
Cops9Q3U898 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Cops9Q3U898 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cops9Q3U898 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC8.8□□□□□ -1
Cops9Q3U898 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Cops9Q3U898 Gm42863-201ENSMUST00000197875 2958 ntBASIC8.8□□□□□ -1
Cops9Q3U898 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cops9Q3U898 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC8.8□□□□□ -1
Cops9Q3U898 Gm7153-201ENSMUST00000117092 455 ntBASIC8.8□□□□□ -1
Cops9Q3U898 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC8.8□□□□□ -1
Cops9Q3U898 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC8.8□□□□□ -1
Cops9Q3U898 Gm11557-201ENSMUST00000120200 1008 ntBASIC8.8□□□□□ -1
Cops9Q3U898 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC8.8□□□□□ -1
Cops9Q3U898 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cops9Q3U898 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC8.8□□□□□ -1
Cops9Q3U898 Gm8927-201ENSMUST00000181978 981 ntBASIC8.8□□□□□ -1
Cops9Q3U898 Gm4804-201ENSMUST00000182234 999 ntBASIC8.8□□□□□ -1
Cops9Q3U898 Mir6982-201ENSMUST00000184354 68 ntBASIC8.8□□□□□ -1
Cops9Q3U898 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC8.8□□□□□ -1
Cops9Q3U898 CT030684.1-201ENSMUST00000227292 914 ntBASIC8.8□□□□□ -1
Cops9Q3U898 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Gm3222-201ENSMUST00000071282 990 ntBASIC8.8□□□□□ -1
Cops9Q3U898 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Cops9Q3U898 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cops9Q3U898 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Rab3c-202ENSMUST00000223922 2398 ntBASIC8.8□□□□□ -1
Cops9Q3U898 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cops9Q3U898 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cops9Q3U898 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC8.8□□□□□ -1
Cops9Q3U898 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cops9Q3U898 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC8.8□□□□□ -1
Cops9Q3U898 Gm13859-201ENSMUST00000119936 1423 ntBASIC8.8□□□□□ -1
Cops9Q3U898 Ptprm-203ENSMUST00000224091 3773 ntBASIC8.79□□□□□ -1
Cops9Q3U898 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cops9Q3U898 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cops9Q3U898 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms