Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Gm15240-201ENSMUST00000118156 720 ntBASIC10□□□□□ -0.81
Smim6Q3U0I6 Gm12428-201ENSMUST00000119844 727 ntBASIC10□□□□□ -0.81
Smim6Q3U0I6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Mir8098-201ENSMUST00000184011 137 ntBASIC10□□□□□ -0.81
Smim6Q3U0I6 Gm28033-201ENSMUST00000184224 96 ntBASIC10□□□□□ -0.81
Smim6Q3U0I6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Gm10371-202ENSMUST00000228010 1081 ntBASIC10□□□□□ -0.81
Smim6Q3U0I6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Gm5161-201ENSMUST00000075243 853 ntBASIC10□□□□□ -0.81
Smim6Q3U0I6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Smim6Q3U0I6 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10□□□□□ -0.81
Smim6Q3U0I6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10□□□□□ -0.81
Smim6Q3U0I6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10□□□□□ -0.81
Smim6Q3U0I6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smim6Q3U0I6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Gm13884-201ENSMUST00000118103 829 ntBASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smim6Q3U0I6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms