Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.94□□□□□ -0.18
Col9a2Q07643 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.94□□□□□ -0.18
Col9a2Q07643 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Gm20482-202ENSMUST00000174729 825 ntBASIC13.94□□□□□ -0.18
Col9a2Q07643 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.94□□□□□ -0.18
Col9a2Q07643 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.94□□□□□ -0.18
Col9a2Q07643 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.94□□□□□ -0.18
Col9a2Q07643 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a2Q07643 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Col9a2Q07643 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Col9a2Q07643 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.93□□□□□ -0.18
Col9a2Q07643 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Col9a2Q07643 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm10434-201ENSMUST00000101158 471 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm14726-201ENSMUST00000120623 896 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm13813-201ENSMUST00000120998 787 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm27320-201ENSMUST00000184892 109 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm39404-201ENSMUST00000216350 313 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm8712-201ENSMUST00000221090 701 ntBASIC13.93□□□□□ -0.18
Col9a2Q07643 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col9a2Q07643 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Col9a2Q07643 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col9a2Q07643 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col9a2Q07643 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.93□□□□□ -0.18
Col9a2Q07643 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a2Q07643 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Mir874-201ENSMUST00000104769 76 ntBASIC13.92□□□□□ -0.18
Col9a2Q07643 Gm11597-201ENSMUST00000121423 964 ntBASIC13.92□□□□□ -0.18
Col9a2Q07643 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.92□□□□□ -0.18
Col9a2Q07643 Gm44405-201ENSMUST00000198952 126 ntBASIC13.92□□□□□ -0.18
Col9a2Q07643 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Gm5904-201ENSMUST00000210286 865 ntBASIC13.92□□□□□ -0.18
Col9a2Q07643 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms