Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Col9a1Q05722 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col9a1Q05722 Gm29036-201ENSMUST00000189967 877 ntBASIC12.81□□□□□ -0.36
Col9a1Q05722 Gm28071-201ENSMUST00000190355 478 ntBASIC12.81□□□□□ -0.36
Col9a1Q05722 Gm32999-201ENSMUST00000192693 562 ntBASIC12.81□□□□□ -0.36
Col9a1Q05722 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC12.81□□□□□ -0.36
Col9a1Q05722 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.81□□□□□ -0.36
Col9a1Q05722 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col9a1Q05722 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col9a1Q05722 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col9a1Q05722 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.8□□□□□ -0.36
Col9a1Q05722 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.8□□□□□ -0.36
Col9a1Q05722 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm1848-201ENSMUST00000120711 789 ntBASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.8□□□□□ -0.36
Col9a1Q05722 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm27039-201ENSMUST00000182438 962 ntBASIC12.8□□□□□ -0.36
Col9a1Q05722 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.8□□□□□ -0.36
Col9a1Q05722 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col9a1Q05722 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm12015-201ENSMUST00000117065 843 ntBASIC12.79□□□□□ -0.36
Col9a1Q05722 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm12990-201ENSMUST00000120372 468 ntBASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm25043-201ENSMUST00000158604 212 ntBASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm29755-201ENSMUST00000196976 948 ntBASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Gm4604-201ENSMUST00000025040 390 ntBASIC12.79□□□□□ -0.36
Col9a1Q05722 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms