Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.23□□□□□ -0.45
Nkx3-2P97503 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx3-2P97503 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Gm42627-201ENSMUST00000197347 224 ntBASIC12.22□□□□□ -0.45
Nkx3-2P97503 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.22□□□□□ -0.45
Nkx3-2P97503 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx3-2P97503 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Gm22018-201ENSMUST00000104357 131 ntBASIC12.21□□□□□ -0.45
Nkx3-2P97503 Mir1247-201ENSMUST00000116706 82 ntBASIC12.21□□□□□ -0.45
Nkx3-2P97503 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Gm27572-201ENSMUST00000183702 255 ntBASIC12.21□□□□□ -0.45
Nkx3-2P97503 Gm43118-201ENSMUST00000199149 775 ntBASIC12.21□□□□□ -0.45
Nkx3-2P97503 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.21□□□□□ -0.45
Nkx3-2P97503 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx3-2P97503 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.21□□□□□ -0.45
Nkx3-2P97503 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx3-2P97503 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx3-2P97503 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Nkx3-2P97503 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx3-2P97503 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
Nkx3-2P97503 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx3-2P97503 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx3-2P97503 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Nkx3-2P97503 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.2□□□□□ -0.46
Nkx3-2P97503 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.2□□□□□ -0.46
Nkx3-2P97503 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx3-2P97503 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Gm25261-201ENSMUST00000157416 134 ntBASIC12.2□□□□□ -0.46
Nkx3-2P97503 Gm28693-202ENSMUST00000190758 331 ntBASIC12.2□□□□□ -0.46
Nkx3-2P97503 Gm37008-201ENSMUST00000195712 319 ntBASIC12.2□□□□□ -0.46
Nkx3-2P97503 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.2□□□□□ -0.46
Nkx3-2P97503 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.2□□□□□ -0.46
Nkx3-2P97503 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.2□□□□□ -0.46
Nkx3-2P97503 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.2□□□□□ -0.46
Nkx3-2P97503 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx3-2P97503 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms