Protein–RNA interactions for Protein: P81067

Irx3, Iroquois-class homeodomain protein IRX-3, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irx3P81067 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.3■□□□□ 0.2
Irx3P81067 Gm27731-201ENSMUST00000185192 107 ntBASIC16.3■□□□□ 0.2
Irx3P81067 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Irx3P81067 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.3■□□□□ 0.2
Irx3P81067 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Irx3P81067 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irx3P81067 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC16.3■□□□□ 0.2
Irx3P81067 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Irx3P81067 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Irx3P81067 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Gm38273-201ENSMUST00000194987 2382 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Gm5859-201ENSMUST00000165401 2324 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.29■□□□□ 0.2
Irx3P81067 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Irx3P81067 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Irx3P81067 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.29■□□□□ 0.2
Irx3P81067 Gm27847-201ENSMUST00000183711 107 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Gm27375-201ENSMUST00000183799 107 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Gm37424-201ENSMUST00000191727 561 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Gm19078-201ENSMUST00000206311 727 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.29■□□□□ 0.2
Irx3P81067 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.29■□□□□ 0.2
Irx3P81067 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Gm18027-201ENSMUST00000218947 619 ntBASIC16.29■□□□□ 0.2
Irx3P81067 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Gm6091-201ENSMUST00000098307 165 ntBASIC16.29■□□□□ 0.2
Irx3P81067 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Irx3P81067 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Irx3P81067 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC16.29■□□□□ 0.2
Irx3P81067 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irx3P81067 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irx3P81067 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irx3P81067 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 Gm11524-201ENSMUST00000119349 807 ntBASIC16.28■□□□□ 0.2
Irx3P81067 Gm11814-201ENSMUST00000119515 929 ntBASIC16.28■□□□□ 0.2
Irx3P81067 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.28■□□□□ 0.2
Irx3P81067 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irx3P81067 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.28■□□□□ 0.2
Irx3P81067 Gm7287-201ENSMUST00000205267 602 ntBASIC16.28■□□□□ 0.2
Irx3P81067 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.28■□□□□ 0.2
Irx3P81067 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.28■□□□□ 0.2
Irx3P81067 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irx3P81067 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irx3P81067 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irx3P81067 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Irx3P81067 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.28■□□□□ 0.2
Irx3P81067 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irx3P81067 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irx3P81067 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC16.27■□□□□ 0.2
Irx3P81067 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.27■□□□□ 0.2
Irx3P81067 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms