Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.97□□□□□ -0.17
CiitaP79621 Gm37259-201ENSMUST00000193903 849 ntBASIC13.97□□□□□ -0.17
CiitaP79621 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.97□□□□□ -0.17
CiitaP79621 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CiitaP79621 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.97□□□□□ -0.17
CiitaP79621 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CiitaP79621 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.97□□□□□ -0.17
CiitaP79621 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CiitaP79621 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.96□□□□□ -0.17
CiitaP79621 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CiitaP79621 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CiitaP79621 Gm10434-201ENSMUST00000101158 471 ntBASIC13.96□□□□□ -0.17
CiitaP79621 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CiitaP79621 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.96□□□□□ -0.17
CiitaP79621 Gm2991-201ENSMUST00000173338 480 ntBASIC13.96□□□□□ -0.17
CiitaP79621 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.96□□□□□ -0.17
CiitaP79621 Gm7584-201ENSMUST00000175829 940 ntBASIC13.96□□□□□ -0.17
CiitaP79621 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CiitaP79621 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CiitaP79621 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CiitaP79621 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CiitaP79621 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CiitaP79621 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CiitaP79621 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CiitaP79621 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CiitaP79621 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CiitaP79621 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.95□□□□□ -0.18
CiitaP79621 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CiitaP79621 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CiitaP79621 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CiitaP79621 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Gm24255-201ENSMUST00000104481 128 ntBASIC13.95□□□□□ -0.18
CiitaP79621 Gm13350-201ENSMUST00000120519 479 ntBASIC13.95□□□□□ -0.18
CiitaP79621 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.95□□□□□ -0.18
CiitaP79621 Gm11964-201ENSMUST00000120982 444 ntBASIC13.95□□□□□ -0.18
CiitaP79621 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.95□□□□□ -0.18
CiitaP79621 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.95□□□□□ -0.18
CiitaP79621 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.95□□□□□ -0.18
CiitaP79621 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CiitaP79621 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CiitaP79621 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CiitaP79621 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CiitaP79621 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.95□□□□□ -0.18
CiitaP79621 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CiitaP79621 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CiitaP79621 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.95□□□□□ -0.18
CiitaP79621 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CiitaP79621 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CiitaP79621 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CiitaP79621 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms