Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.26□□□□□ -0.29
Msx3P70354 Gm14921-201ENSMUST00000118643 908 ntBASIC13.26□□□□□ -0.29
Msx3P70354 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Msx3P70354 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.26□□□□□ -0.29
Msx3P70354 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Msx3P70354 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.26□□□□□ -0.29
Msx3P70354 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.26□□□□□ -0.29
Msx3P70354 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.26□□□□□ -0.29
Msx3P70354 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.26□□□□□ -0.29
Msx3P70354 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.26□□□□□ -0.29
Msx3P70354 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Msx3P70354 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Gm5356-201ENSMUST00000093326 615 ntBASIC13.26□□□□□ -0.29
Msx3P70354 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.26□□□□□ -0.29
Msx3P70354 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Msx3P70354 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msx3P70354 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Msx3P70354 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Msx3P70354 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Msx3P70354 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.25□□□□□ -0.29
Msx3P70354 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.25□□□□□ -0.29
Msx3P70354 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Gm11637-201ENSMUST00000120601 592 ntBASIC13.25□□□□□ -0.29
Msx3P70354 Mir1894-201ENSMUST00000122802 81 ntBASIC13.25□□□□□ -0.29
Msx3P70354 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.25□□□□□ -0.29
Msx3P70354 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.25□□□□□ -0.29
Msx3P70354 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.25□□□□□ -0.29
Msx3P70354 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Msx3P70354 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.25□□□□□ -0.29
Msx3P70354 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.25□□□□□ -0.29
Msx3P70354 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.25□□□□□ -0.29
Msx3P70354 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msx3P70354 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.25□□□□□ -0.29
Msx3P70354 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.24□□□□□ -0.29
Msx3P70354 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Msx3P70354 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Msx3P70354 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Msx3P70354 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Msx3P70354 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Msx3P70354 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Msx3P70354 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.24□□□□□ -0.29
Msx3P70354 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Msx3P70354 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
Msx3P70354 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.24□□□□□ -0.29
Msx3P70354 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms