Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Gm6447-201ENSMUST00000118905 835 ntBASIC11.46□□□□□ -0.57
Sf3b6P59708 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.46□□□□□ -0.57
Sf3b6P59708 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.46□□□□□ -0.57
Sf3b6P59708 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Gm29608-201ENSMUST00000190444 463 ntBASIC11.46□□□□□ -0.57
Sf3b6P59708 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.46□□□□□ -0.57
Sf3b6P59708 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.46□□□□□ -0.57
Sf3b6P59708 Thoc7-209ENSMUST00000225325 765 ntBASIC11.46□□□□□ -0.57
Sf3b6P59708 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.46□□□□□ -0.57
Sf3b6P59708 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Sf3b6P59708 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Sf3b6P59708 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Sf3b6P59708 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Sf3b6P59708 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3b6P59708 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sf3b6P59708 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3b6P59708 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.44□□□□□ -0.58
Sf3b6P59708 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sf3b6P59708 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sf3b6P59708 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.44□□□□□ -0.58
Sf3b6P59708 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.44□□□□□ -0.58
Sf3b6P59708 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.44□□□□□ -0.58
Sf3b6P59708 Gm27390-201ENSMUST00000184516 176 ntBASIC11.44□□□□□ -0.58
Sf3b6P59708 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Gm17795-201ENSMUST00000214505 757 ntBASIC11.44□□□□□ -0.58
Sf3b6P59708 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sf3b6P59708 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms