Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Mir5120-201ENSMUST00000175020 78 ntBASIC17.3■□□□□ 0.36
Nphp4P59240 Mir5132-201ENSMUST00000175166 71 ntBASIC17.3■□□□□ 0.36
Nphp4P59240 Mir6927-201ENSMUST00000184494 71 ntBASIC17.3■□□□□ 0.36
Nphp4P59240 Gm44958-201ENSMUST00000203734 736 ntBASIC17.3■□□□□ 0.36
Nphp4P59240 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC17.3■□□□□ 0.36
Nphp4P59240 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC17.3■□□□□ 0.36
Nphp4P59240 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC17.3■□□□□ 0.36
Nphp4P59240 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Gm9996-201ENSMUST00000070359 913 ntBASIC17.3■□□□□ 0.36
Nphp4P59240 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Grk6-205ENSMUST00000224653 2976 ntBASIC17.29■□□□□ 0.36
Nphp4P59240 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Gm43045-201ENSMUST00000198725 2095 ntBASIC17.29■□□□□ 0.36
Nphp4P59240 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nphp4P59240 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC17.29■□□□□ 0.36
Nphp4P59240 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC17.29■□□□□ 0.36
Nphp4P59240 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nphp4P59240 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 AC159205.5-202ENSMUST00000224849 386 ntBASIC17.29■□□□□ 0.36
Nphp4P59240 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nphp4P59240 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nphp4P59240 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Nphp4P59240 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Gm18626-201ENSMUST00000221512 1409 ntBASIC17.28■□□□□ 0.36
Nphp4P59240 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
Nphp4P59240 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Nphp4P59240 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.28■□□□□ 0.36
Nphp4P59240 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC17.28■□□□□ 0.36
Nphp4P59240 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Nphp4P59240 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC17.28■□□□□ 0.36
Nphp4P59240 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Gm5616-201ENSMUST00000165252 384 ntBASIC17.28■□□□□ 0.36
Nphp4P59240 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC17.28■□□□□ 0.36
Nphp4P59240 Gm8741-201ENSMUST00000174736 384 ntBASIC17.28■□□□□ 0.36
Nphp4P59240 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nphp4P59240 Gm9230-201ENSMUST00000188228 532 ntBASIC17.28■□□□□ 0.36
Nphp4P59240 Gm17812-201ENSMUST00000204935 318 ntBASIC17.28■□□□□ 0.36
Nphp4P59240 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nphp4P59240 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC17.27■□□□□ 0.36
Nphp4P59240 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC17.27■□□□□ 0.36
Nphp4P59240 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.27■□□□□ 0.36
Nphp4P59240 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Nphp4P59240 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nphp4P59240 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nphp4P59240 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nphp4P59240 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Nphp4P59240 Gm28450-201ENSMUST00000187349 638 ntBASIC17.27■□□□□ 0.35
Nphp4P59240 Gm45433-201ENSMUST00000209386 247 ntBASIC17.27■□□□□ 0.35
Nphp4P59240 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC17.27■□□□□ 0.35
Nphp4P59240 AC154252.2-201ENSMUST00000223593 767 ntBASIC17.27■□□□□ 0.35
Nphp4P59240 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp4P59240 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp4P59240 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.27■□□□□ 0.35
Nphp4P59240 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Nphp4P59240 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp4P59240 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp4P59240 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Nphp4P59240 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp4P59240 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Nphp4P59240 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Nphp4P59240 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nphp4P59240 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.26■□□□□ 0.35
Nphp4P59240 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms