Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.2□□□□□ -0.46
Nup43P59235 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nup43P59235 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.19□□□□□ -0.46
Nup43P59235 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.19□□□□□ -0.46
Nup43P59235 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.19□□□□□ -0.46
Nup43P59235 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.19□□□□□ -0.46
Nup43P59235 Gm18062-201ENSMUST00000208020 547 ntBASIC12.19□□□□□ -0.46
Nup43P59235 Gm18055-201ENSMUST00000208254 547 ntBASIC12.19□□□□□ -0.46
Nup43P59235 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nup43P59235 Gm25857-201ENSMUST00000082788 129 ntBASIC12.19□□□□□ -0.46
Nup43P59235 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nup43P59235 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nup43P59235 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.19□□□□□ -0.46
Nup43P59235 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.19□□□□□ -0.46
Nup43P59235 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.19□□□□□ -0.46
Nup43P59235 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup43P59235 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.18□□□□□ -0.46
Nup43P59235 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.18□□□□□ -0.46
Nup43P59235 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.18□□□□□ -0.46
Nup43P59235 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nup43P59235 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.18□□□□□ -0.46
Nup43P59235 Gm14704-201ENSMUST00000120300 874 ntBASIC12.18□□□□□ -0.46
Nup43P59235 Gm12291-201ENSMUST00000121627 311 ntBASIC12.18□□□□□ -0.46
Nup43P59235 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.18□□□□□ -0.46
Nup43P59235 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.18□□□□□ -0.46
Nup43P59235 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.18□□□□□ -0.46
Nup43P59235 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.18□□□□□ -0.46
Nup43P59235 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.18□□□□□ -0.46
Nup43P59235 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.18□□□□□ -0.46
Nup43P59235 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.18□□□□□ -0.46
Nup43P59235 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nup43P59235 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nup43P59235 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.18□□□□□ -0.46
Nup43P59235 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.18□□□□□ -0.46
Nup43P59235 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nup43P59235 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.18□□□□□ -0.46
Nup43P59235 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup43P59235 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.18□□□□□ -0.46
Nup43P59235 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup43P59235 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup43P59235 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup43P59235 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup43P59235 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup43P59235 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Nup43P59235 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nup43P59235 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Nup43P59235 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup43P59235 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms