Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.43□□□□□ -0.74
Sssca1P56873 Gm26464-201ENSMUST00000157094 305 ntBASIC10.43□□□□□ -0.74
Sssca1P56873 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.43□□□□□ -0.74
Sssca1P56873 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.43□□□□□ -0.74
Sssca1P56873 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.43□□□□□ -0.74
Sssca1P56873 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Sssca1P56873 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Sssca1P56873 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.43□□□□□ -0.74
Sssca1P56873 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Sssca1P56873 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sssca1P56873 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.42□□□□□ -0.74
Sssca1P56873 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Sssca1P56873 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.42□□□□□ -0.74
Sssca1P56873 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.42□□□□□ -0.74
Sssca1P56873 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.42□□□□□ -0.74
Sssca1P56873 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.42□□□□□ -0.74
Sssca1P56873 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.42□□□□□ -0.74
Sssca1P56873 Gm5279-201ENSMUST00000199575 745 ntBASIC10.42□□□□□ -0.74
Sssca1P56873 Gm42550-201ENSMUST00000201553 960 ntBASIC10.42□□□□□ -0.74
Sssca1P56873 Gm19078-201ENSMUST00000206311 727 ntBASIC10.42□□□□□ -0.74
Sssca1P56873 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sssca1P56873 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Sssca1P56873 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.42□□□□□ -0.74
Sssca1P56873 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Sssca1P56873 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.41□□□□□ -0.74
Sssca1P56873 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Sssca1P56873 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.41□□□□□ -0.74
Sssca1P56873 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.41□□□□□ -0.74
Sssca1P56873 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.41□□□□□ -0.74
Sssca1P56873 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.41□□□□□ -0.74
Sssca1P56873 Gm15376-201ENSMUST00000122258 783 ntBASIC10.41□□□□□ -0.74
Sssca1P56873 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Sssca1P56873 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms