Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.96□□□□□ -0.33
SmoP56726 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.96□□□□□ -0.33
SmoP56726 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SmoP56726 Gm8227-201ENSMUST00000223306 571 ntBASIC12.96□□□□□ -0.33
SmoP56726 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SmoP56726 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SmoP56726 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SmoP56726 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.96□□□□□ -0.33
SmoP56726 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SmoP56726 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SmoP56726 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
SmoP56726 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SmoP56726 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.96□□□□□ -0.34
SmoP56726 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SmoP56726 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
SmoP56726 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.95□□□□□ -0.34
SmoP56726 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SmoP56726 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.95□□□□□ -0.34
SmoP56726 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SmoP56726 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Mir6420-201ENSMUST00000185032 102 ntBASIC12.95□□□□□ -0.34
SmoP56726 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.95□□□□□ -0.34
SmoP56726 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.95□□□□□ -0.34
SmoP56726 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SmoP56726 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.95□□□□□ -0.34
SmoP56726 Gm7046-201ENSMUST00000221351 977 ntBASIC12.95□□□□□ -0.34
SmoP56726 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Gm24526-201ENSMUST00000082921 158 ntBASIC12.95□□□□□ -0.34
SmoP56726 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.95□□□□□ -0.34
SmoP56726 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.95□□□□□ -0.34
SmoP56726 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SmoP56726 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SmoP56726 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SmoP56726 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.94□□□□□ -0.34
SmoP56726 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.94□□□□□ -0.34
SmoP56726 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Gm13297-201ENSMUST00000120205 934 ntBASIC12.94□□□□□ -0.34
SmoP56726 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.94□□□□□ -0.34
SmoP56726 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.94□□□□□ -0.34
SmoP56726 Gm16296-201ENSMUST00000159905 325 ntBASIC12.94□□□□□ -0.34
SmoP56726 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SmoP56726 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.94□□□□□ -0.34
SmoP56726 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.94□□□□□ -0.34
SmoP56726 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SmoP56726 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.94□□□□□ -0.34
SmoP56726 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SmoP56726 Olfr582-201ENSMUST00000098212 960 ntBASIC12.94□□□□□ -0.34
SmoP56726 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SmoP56726 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms