Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.78□□□□□ -0.52
Cdh11P55288 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh11P55288 Gm43094-201ENSMUST00000196549 921 ntBASIC11.78□□□□□ -0.52
Cdh11P55288 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cdh11P55288 Gm45841-201ENSMUST00000207700 164 ntBASIC11.78□□□□□ -0.52
Cdh11P55288 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh11P55288 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh11P55288 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh11P55288 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh11P55288 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh11P55288 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh11P55288 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh11P55288 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Cdh11P55288 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh11P55288 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh11P55288 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh11P55288 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.77□□□□□ -0.53
Cdh11P55288 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.77□□□□□ -0.53
Cdh11P55288 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.77□□□□□ -0.53
Cdh11P55288 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.77□□□□□ -0.53
Cdh11P55288 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cdh11P55288 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.77□□□□□ -0.53
Cdh11P55288 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cdh11P55288 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdh11P55288 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cdh11P55288 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.77□□□□□ -0.53
Cdh11P55288 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Cdh11P55288 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdh11P55288 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdh11P55288 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.77□□□□□ -0.53
Cdh11P55288 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdh11P55288 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh11P55288 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh11P55288 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh11P55288 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.76□□□□□ -0.53
Cdh11P55288 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.76□□□□□ -0.53
Cdh11P55288 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdh11P55288 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Gm12485-201ENSMUST00000119641 291 ntBASIC11.76□□□□□ -0.53
Cdh11P55288 Gm15376-201ENSMUST00000122258 783 ntBASIC11.76□□□□□ -0.53
Cdh11P55288 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.76□□□□□ -0.53
Cdh11P55288 Gm27892-201ENSMUST00000185017 106 ntBASIC11.76□□□□□ -0.53
Cdh11P55288 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.76□□□□□ -0.53
Cdh11P55288 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdh11P55288 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Gm25857-201ENSMUST00000082788 129 ntBASIC11.76□□□□□ -0.53
Cdh11P55288 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cdh11P55288 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms