Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm8515-201ENSMUST00000194852 576 ntBASIC12.91□□□□□ -0.34
Fdft1P53798 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.91□□□□□ -0.34
Fdft1P53798 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.91□□□□□ -0.34
Fdft1P53798 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Fdft1P53798 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.91□□□□□ -0.34
Fdft1P53798 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Fdft1P53798 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.91□□□□□ -0.34
Fdft1P53798 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Fdft1P53798 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.91□□□□□ -0.34
Fdft1P53798 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Fdft1P53798 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Fdft1P53798 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Fdft1P53798 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.9□□□□□ -0.34
Fdft1P53798 Gm5687-201ENSMUST00000118252 640 ntBASIC12.9□□□□□ -0.34
Fdft1P53798 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.9□□□□□ -0.34
Fdft1P53798 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.9□□□□□ -0.34
Fdft1P53798 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.9□□□□□ -0.34
Fdft1P53798 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.9□□□□□ -0.34
Fdft1P53798 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.9□□□□□ -0.34
Fdft1P53798 Gm27701-201ENSMUST00000184498 110 ntBASIC12.9□□□□□ -0.34
Fdft1P53798 Gm28911-201ENSMUST00000188837 117 ntBASIC12.9□□□□□ -0.34
Fdft1P53798 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.9□□□□□ -0.34
Fdft1P53798 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Fdft1P53798 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.9□□□□□ -0.34
Fdft1P53798 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Gm6180-201ENSMUST00000065243 498 ntBASIC12.9□□□□□ -0.34
Fdft1P53798 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fdft1P53798 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Fdft1P53798 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Fdft1P53798 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Fdft1P53798 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.89□□□□□ -0.35
Fdft1P53798 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Fdft1P53798 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Gm14350-201ENSMUST00000116642 640 ntBASIC12.89□□□□□ -0.35
Fdft1P53798 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.89□□□□□ -0.35
Fdft1P53798 Gm6152-201ENSMUST00000151704 340 ntBASIC12.89□□□□□ -0.35
Fdft1P53798 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.89□□□□□ -0.35
Fdft1P53798 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Fdft1P53798 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.89□□□□□ -0.35
Fdft1P53798 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fdft1P53798 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.88□□□□□ -0.35
Fdft1P53798 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.88□□□□□ -0.35
Fdft1P53798 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.88□□□□□ -0.35
Fdft1P53798 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fdft1P53798 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms