Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Lbx1P52955 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Trav11n-201ENSMUST00000200113 343 ntBASIC12.48□□□□□ -0.41
Lbx1P52955 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.48□□□□□ -0.41
Lbx1P52955 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.48□□□□□ -0.41
Lbx1P52955 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.48□□□□□ -0.41
Lbx1P52955 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.48□□□□□ -0.41
Lbx1P52955 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.48□□□□□ -0.41
Lbx1P52955 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.47□□□□□ -0.41
Lbx1P52955 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Lbx1P52955 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lbx1P52955 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm11979-201ENSMUST00000119629 743 ntBASIC12.47□□□□□ -0.41
Lbx1P52955 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Lbx1P52955 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.47□□□□□ -0.41
Lbx1P52955 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm4868-201ENSMUST00000164138 789 ntBASIC12.47□□□□□ -0.41
Lbx1P52955 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm27910-201ENSMUST00000185004 107 ntBASIC12.47□□□□□ -0.41
Lbx1P52955 Gm3332-201ENSMUST00000189337 928 ntBASIC12.47□□□□□ -0.41
Lbx1P52955 Gm37201-201ENSMUST00000191845 523 ntBASIC12.47□□□□□ -0.41
Lbx1P52955 Mir7686-201ENSMUST00000200604 57 ntBASIC12.47□□□□□ -0.41
Lbx1P52955 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm45598-202ENSMUST00000210719 986 ntBASIC12.47□□□□□ -0.41
Lbx1P52955 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm45500-201ENSMUST00000211676 803 ntBASIC12.47□□□□□ -0.41
Lbx1P52955 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.47□□□□□ -0.41
Lbx1P52955 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lbx1P52955 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lbx1P52955 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.47□□□□□ -0.41
Lbx1P52955 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.47□□□□□ -0.41
Lbx1P52955 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.47□□□□□ -0.41
Lbx1P52955 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lbx1P52955 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.46□□□□□ -0.41
Lbx1P52955 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lbx1P52955 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Gm7851-201ENSMUST00000117574 323 ntBASIC12.46□□□□□ -0.41
Lbx1P52955 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.46□□□□□ -0.41
Lbx1P52955 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.46□□□□□ -0.41
Lbx1P52955 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.46□□□□□ -0.41
Lbx1P52955 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lbx1P52955 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.46□□□□□ -0.41
Lbx1P52955 Gm7904-201ENSMUST00000217049 465 ntBASIC12.46□□□□□ -0.41
Lbx1P52955 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.46□□□□□ -0.41
Lbx1P52955 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lbx1P52955 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms