Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm8062-201ENSMUST00000139696 444 ntBASIC15.33■□□□□ 0.04
Ercc3P49135 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.33■□□□□ 0.04
Ercc3P49135 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.33■□□□□ 0.04
Ercc3P49135 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.33■□□□□ 0.04
Ercc3P49135 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.33■□□□□ 0.04
Ercc3P49135 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.33■□□□□ 0.04
Ercc3P49135 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.33■□□□□ 0.04
Ercc3P49135 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Ercc3P49135 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.33■□□□□ 0.04
Ercc3P49135 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.33■□□□□ 0.04
Ercc3P49135 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.33■□□□□ 0.04
Ercc3P49135 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.33■□□□□ 0.04
Ercc3P49135 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc3P49135 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Ercc3P49135 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Gm12384-201ENSMUST00000119228 919 ntBASIC15.32■□□□□ 0.04
Ercc3P49135 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Gm17208-201ENSMUST00000168388 535 ntBASIC15.32■□□□□ 0.04
Ercc3P49135 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.32■□□□□ 0.04
Ercc3P49135 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.32■□□□□ 0.04
Ercc3P49135 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ercc3P49135 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.32■□□□□ 0.04
Ercc3P49135 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc3P49135 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.32■□□□□ 0.04
Ercc3P49135 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ercc3P49135 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ercc3P49135 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Ercc3P49135 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ercc3P49135 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Mir874-201ENSMUST00000104769 76 ntBASIC15.31■□□□□ 0.04
Ercc3P49135 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.31■□□□□ 0.04
Ercc3P49135 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.31■□□□□ 0.04
Ercc3P49135 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ercc3P49135 AY702102-202ENSMUST00000194651 1173 ntBASIC15.31■□□□□ 0.04
Ercc3P49135 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.31■□□□□ 0.04
Ercc3P49135 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.31■□□□□ 0.04
Ercc3P49135 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ercc3P49135 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.31■□□□□ 0.04
Ercc3P49135 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.31■□□□□ 0.04
Ercc3P49135 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc3P49135 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Gm22018-201ENSMUST00000104357 131 ntBASIC15.3■□□□□ 0.04
Ercc3P49135 Gm14704-201ENSMUST00000120300 874 ntBASIC15.3■□□□□ 0.04
Ercc3P49135 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.3■□□□□ 0.04
Ercc3P49135 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.3■□□□□ 0.04
Ercc3P49135 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms