Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.2□□□□□ -0.14
Brca1P48754 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.2□□□□□ -0.14
Brca1P48754 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Brca1P48754 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Brca1P48754 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.2□□□□□ -0.14
Brca1P48754 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Brca1P48754 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.2□□□□□ -0.14
Brca1P48754 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.2□□□□□ -0.14
Brca1P48754 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.2□□□□□ -0.14
Brca1P48754 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Gm8325-201ENSMUST00000099086 453 ntBASIC14.2□□□□□ -0.14
Brca1P48754 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.2□□□□□ -0.14
Brca1P48754 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.2□□□□□ -0.14
Brca1P48754 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brca1P48754 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Brca1P48754 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.19□□□□□ -0.14
Brca1P48754 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Gm23085-201ENSMUST00000157849 293 ntBASIC14.19□□□□□ -0.14
Brca1P48754 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.19□□□□□ -0.14
Brca1P48754 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.19□□□□□ -0.14
Brca1P48754 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.19□□□□□ -0.14
Brca1P48754 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.19□□□□□ -0.14
Brca1P48754 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.19□□□□□ -0.14
Brca1P48754 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.19□□□□□ -0.14
Brca1P48754 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.19□□□□□ -0.14
Brca1P48754 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.19□□□□□ -0.14
Brca1P48754 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Brca1P48754 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brca1P48754 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Brca1P48754 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Brca1P48754 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Brca1P48754 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Brca1P48754 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.18□□□□□ -0.14
Brca1P48754 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Gm6905-201ENSMUST00000205729 511 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.18□□□□□ -0.14
Brca1P48754 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Brca1P48754 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Brca1P48754 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Brca1P48754 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Brca1P48754 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Brca1P48754 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.18□□□□□ -0.14
Brca1P48754 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.18□□□□□ -0.14
Brca1P48754 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Brca1P48754 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Brca1P48754 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brca1P48754 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Brca1P48754 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms