Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.33□□□□□ -0.6
GdnfP48540 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
GdnfP48540 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
GdnfP48540 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.33□□□□□ -0.6
GdnfP48540 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
GdnfP48540 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
GdnfP48540 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.33□□□□□ -0.6
GdnfP48540 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
GdnfP48540 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.32□□□□□ -0.6
GdnfP48540 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.32□□□□□ -0.6
GdnfP48540 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
GdnfP48540 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.32□□□□□ -0.6
GdnfP48540 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.32□□□□□ -0.6
GdnfP48540 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.32□□□□□ -0.6
GdnfP48540 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.32□□□□□ -0.6
GdnfP48540 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
GdnfP48540 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.32□□□□□ -0.6
GdnfP48540 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.32□□□□□ -0.6
GdnfP48540 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.32□□□□□ -0.6
GdnfP48540 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.32□□□□□ -0.6
GdnfP48540 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.32□□□□□ -0.6
GdnfP48540 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.32□□□□□ -0.6
GdnfP48540 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
GdnfP48540 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
GdnfP48540 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
GdnfP48540 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
GdnfP48540 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GdnfP48540 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
GdnfP48540 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.31□□□□□ -0.6
GdnfP48540 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
GdnfP48540 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
GdnfP48540 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
GdnfP48540 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
GdnfP48540 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.31□□□□□ -0.6
GdnfP48540 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
GdnfP48540 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GdnfP48540 Gm25927-201ENSMUST00000175058 117 ntBASIC11.31□□□□□ -0.6
GdnfP48540 Mir7221-201ENSMUST00000184009 72 ntBASIC11.31□□□□□ -0.6
GdnfP48540 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms