Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Rfx2P48379 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.53□□□□□ -0.24
Rfx2P48379 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.53□□□□□ -0.24
Rfx2P48379 Gm8805-201ENSMUST00000117848 313 ntBASIC13.53□□□□□ -0.24
Rfx2P48379 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.53□□□□□ -0.24
Rfx2P48379 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.53□□□□□ -0.24
Rfx2P48379 Gm7029-201ENSMUST00000173226 450 ntBASIC13.53□□□□□ -0.24
Rfx2P48379 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rfx2P48379 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.53□□□□□ -0.24
Rfx2P48379 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.53□□□□□ -0.24
Rfx2P48379 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.53□□□□□ -0.24
Rfx2P48379 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.53□□□□□ -0.24
Rfx2P48379 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.53□□□□□ -0.24
Rfx2P48379 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rfx2P48379 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.53□□□□□ -0.24
Rfx2P48379 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Rfx2P48379 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Rfx2P48379 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rfx2P48379 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.53□□□□□ -0.24
Rfx2P48379 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.53□□□□□ -0.24
Rfx2P48379 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rfx2P48379 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rfx2P48379 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx2P48379 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx2P48379 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Rfx2P48379 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx2P48379 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx2P48379 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx2P48379 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rfx2P48379 Gm22018-201ENSMUST00000104357 131 ntBASIC13.52□□□□□ -0.25
Rfx2P48379 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Rfx2P48379 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.52□□□□□ -0.25
Rfx2P48379 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.52□□□□□ -0.25
Rfx2P48379 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.52□□□□□ -0.25
Rfx2P48379 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.52□□□□□ -0.25
Rfx2P48379 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.52□□□□□ -0.25
Rfx2P48379 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.52□□□□□ -0.25
Rfx2P48379 Gm9823-201ENSMUST00000051212 327 ntBASIC13.52□□□□□ -0.25
Rfx2P48379 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rfx2P48379 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.52□□□□□ -0.25
Rfx2P48379 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.52□□□□□ -0.25
Rfx2P48379 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rfx2P48379 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rfx2P48379 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rfx2P48379 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rfx2P48379 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.51□□□□□ -0.25
Rfx2P48379 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rfx2P48379 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.51□□□□□ -0.25
Rfx2P48379 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.51□□□□□ -0.25
Rfx2P48379 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.51□□□□□ -0.25
Rfx2P48379 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfx2P48379 Gm26185-201ENSMUST00000157692 266 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms