Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gli1P47806 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gli1P47806 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gli1P47806 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Gli1P47806 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Gli1P47806 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.61□□□□□ -0.39
Gli1P47806 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Gli1P47806 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.61□□□□□ -0.39
Gli1P47806 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.61□□□□□ -0.39
Gli1P47806 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Gli1P47806 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.61□□□□□ -0.39
Gli1P47806 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.61□□□□□ -0.39
Gli1P47806 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gli1P47806 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Gli1P47806 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gli1P47806 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.61□□□□□ -0.39
Gli1P47806 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gli1P47806 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Gli1P47806 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.6□□□□□ -0.39
Gli1P47806 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.6□□□□□ -0.39
Gli1P47806 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.6□□□□□ -0.39
Gli1P47806 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.6□□□□□ -0.39
Gli1P47806 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.6□□□□□ -0.39
Gli1P47806 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.6□□□□□ -0.39
Gli1P47806 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Gm15240-201ENSMUST00000118156 720 ntBASIC12.6□□□□□ -0.39
Gli1P47806 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.6□□□□□ -0.39
Gli1P47806 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.6□□□□□ -0.39
Gli1P47806 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Gli1P47806 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gli1P47806 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gli1P47806 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.6□□□□□ -0.39
Gli1P47806 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gli1P47806 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gli1P47806 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.6□□□□□ -0.39
Gli1P47806 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.59□□□□□ -0.39
Gli1P47806 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.59□□□□□ -0.39
Gli1P47806 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Gli1P47806 Gm18905-201ENSMUST00000205454 928 ntBASIC12.59□□□□□ -0.39
Gli1P47806 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gli1P47806 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms