Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm12502-201ENSMUST00000120197 444 ntBASIC12.35□□□□□ -0.43
Tnfsf9P41274 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.35□□□□□ -0.43
Tnfsf9P41274 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm8738-201ENSMUST00000172606 329 ntBASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm22121-201ENSMUST00000175148 54 ntBASIC12.35□□□□□ -0.43
Tnfsf9P41274 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Mospd4-201ENSMUST00000180618 576 ntBASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm5904-201ENSMUST00000210286 865 ntBASIC12.35□□□□□ -0.43
Tnfsf9P41274 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm45930-201ENSMUST00000221330 292 ntBASIC12.35□□□□□ -0.43
Tnfsf9P41274 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.35□□□□□ -0.43
Tnfsf9P41274 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf9P41274 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.34□□□□□ -0.43
Tnfsf9P41274 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.34□□□□□ -0.43
Tnfsf9P41274 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.34□□□□□ -0.43
Tnfsf9P41274 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Gm13342-201ENSMUST00000121055 207 ntBASIC12.34□□□□□ -0.43
Tnfsf9P41274 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Gm23363-201ENSMUST00000175024 79 ntBASIC12.34□□□□□ -0.43
Tnfsf9P41274 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.34□□□□□ -0.43
Tnfsf9P41274 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.34□□□□□ -0.43
Tnfsf9P41274 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.34□□□□□ -0.43
Tnfsf9P41274 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.34□□□□□ -0.43
Tnfsf9P41274 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf9P41274 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tnfsf9P41274 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tnfsf9P41274 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms