Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm12151-201ENSMUST00000121374 290 ntBASIC13□□□□□ -0.33
Fen1P39749 Gm12403-201ENSMUST00000121384 959 ntBASIC13□□□□□ -0.33
Fen1P39749 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13□□□□□ -0.33
Fen1P39749 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13□□□□□ -0.33
Fen1P39749 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13□□□□□ -0.33
Fen1P39749 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Fen1P39749 Gm10359-201ENSMUST00000180167 1002 ntBASIC13□□□□□ -0.33
Fen1P39749 Gm12033-201ENSMUST00000180654 1002 ntBASIC13□□□□□ -0.33
Fen1P39749 Gm5559-201ENSMUST00000180755 1002 ntBASIC13□□□□□ -0.33
Fen1P39749 Gm4335-201ENSMUST00000182581 1004 ntBASIC13□□□□□ -0.33
Fen1P39749 Gm27618-201ENSMUST00000183671 60 ntBASIC13□□□□□ -0.33
Fen1P39749 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Fen1P39749 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Gm17795-201ENSMUST00000214505 757 ntBASIC13□□□□□ -0.33
Fen1P39749 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Fen1P39749 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Fen1P39749 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Fen1P39749 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fen1P39749 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.99□□□□□ -0.33
Fen1P39749 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Fen1P39749 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Fen1P39749 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.99□□□□□ -0.33
Fen1P39749 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Fen1P39749 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
Fen1P39749 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.99□□□□□ -0.33
Fen1P39749 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.99□□□□□ -0.33
Fen1P39749 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.99□□□□□ -0.33
Fen1P39749 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Mir8102-201ENSMUST00000184148 139 ntBASIC12.99□□□□□ -0.33
Fen1P39749 Gm19931-201ENSMUST00000198920 368 ntBASIC12.99□□□□□ -0.33
Fen1P39749 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.99□□□□□ -0.33
Fen1P39749 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.99□□□□□ -0.33
Fen1P39749 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.99□□□□□ -0.33
Fen1P39749 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Fen1P39749 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.99□□□□□ -0.33
Fen1P39749 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fen1P39749 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.98□□□□□ -0.33
Fen1P39749 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.98□□□□□ -0.33
Fen1P39749 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Fen1P39749 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.98□□□□□ -0.33
Fen1P39749 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.98□□□□□ -0.33
Fen1P39749 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.98□□□□□ -0.33
Fen1P39749 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Gm13453-201ENSMUST00000118708 357 ntBASIC12.98□□□□□ -0.33
Fen1P39749 Gm14767-201ENSMUST00000121559 586 ntBASIC12.98□□□□□ -0.33
Fen1P39749 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.98□□□□□ -0.33
Fen1P39749 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.98□□□□□ -0.33
Fen1P39749 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.98□□□□□ -0.33
Fen1P39749 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Gm27989-201ENSMUST00000184721 107 ntBASIC12.98□□□□□ -0.33
Fen1P39749 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.98□□□□□ -0.33
Fen1P39749 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.98□□□□□ -0.33
Fen1P39749 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fen1P39749 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms