Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nedd8P29595 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nedd8P29595 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.88□□□□□ -0.51
Nedd8P29595 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.88□□□□□ -0.51
Nedd8P29595 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nedd8P29595 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.88□□□□□ -0.51
Nedd8P29595 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 Mir5126-201ENSMUST00000175513 77 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nedd8P29595 Gm28033-201ENSMUST00000184224 96 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 Ank2-226ENSMUST00000189368 339 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.88□□□□□ -0.51
Nedd8P29595 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Nedd8P29595 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Nedd8P29595 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Nedd8P29595 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.88□□□□□ -0.51
Nedd8P29595 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.88□□□□□ -0.51
Nedd8P29595 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nedd8P29595 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.88□□□□□ -0.51
Nedd8P29595 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nedd8P29595 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nedd8P29595 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nedd8P29595 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.87□□□□□ -0.51
Nedd8P29595 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Nedd8P29595 Gm15427-201ENSMUST00000117288 531 ntBASIC11.87□□□□□ -0.51
Nedd8P29595 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.87□□□□□ -0.51
Nedd8P29595 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.87□□□□□ -0.51
Nedd8P29595 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Gm44492-201ENSMUST00000197012 141 ntBASIC11.87□□□□□ -0.51
Nedd8P29595 Gm20553-201ENSMUST00000204205 844 ntBASIC11.87□□□□□ -0.51
Nedd8P29595 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.87□□□□□ -0.51
Nedd8P29595 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.87□□□□□ -0.51
Nedd8P29595 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.87□□□□□ -0.51
Nedd8P29595 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Nedd8P29595 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.87□□□□□ -0.51
Nedd8P29595 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms