Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Rubie-203ENSMUST00000227803 2430 ntBASIC13.27□□□□□ -0.29
Nfkb1P25799 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nfkb1P25799 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Nfkb1P25799 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.26□□□□□ -0.29
Nfkb1P25799 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.26□□□□□ -0.29
Nfkb1P25799 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.26□□□□□ -0.29
Nfkb1P25799 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.26□□□□□ -0.29
Nfkb1P25799 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.26□□□□□ -0.29
Nfkb1P25799 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.26□□□□□ -0.29
Nfkb1P25799 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nfkb1P25799 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nfkb1P25799 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nfkb1P25799 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nfkb1P25799 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nfkb1P25799 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.25□□□□□ -0.29
Nfkb1P25799 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nfkb1P25799 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Gm13316-201ENSMUST00000140537 691 ntBASIC13.25□□□□□ -0.29
Nfkb1P25799 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.25□□□□□ -0.29
Nfkb1P25799 Gm38241-201ENSMUST00000192641 898 ntBASIC13.25□□□□□ -0.29
Nfkb1P25799 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.25□□□□□ -0.29
Nfkb1P25799 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.25□□□□□ -0.29
Nfkb1P25799 Gm42790-201ENSMUST00000201268 969 ntBASIC13.25□□□□□ -0.29
Nfkb1P25799 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nfkb1P25799 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nfkb1P25799 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nfkb1P25799 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.24□□□□□ -0.29
Nfkb1P25799 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nfkb1P25799 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.24□□□□□ -0.29
Nfkb1P25799 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.24□□□□□ -0.29
Nfkb1P25799 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nfkb1P25799 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms