Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.17□□□□□ -0.46
TP20293 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.17□□□□□ -0.46
TP20293 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Gm10012-201ENSMUST00000078252 192 ntBASIC12.17□□□□□ -0.46
TP20293 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TP20293 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.17□□□□□ -0.46
TP20293 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TP20293 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.17□□□□□ -0.46
TP20293 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TP20293 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TP20293 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TP20293 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.17□□□□□ -0.46
TP20293 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TP20293 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.16□□□□□ -0.46
TP20293 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.16□□□□□ -0.46
TP20293 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.16□□□□□ -0.46
TP20293 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.16□□□□□ -0.46
TP20293 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.16□□□□□ -0.46
TP20293 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.16□□□□□ -0.46
TP20293 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
TP20293 Gm14350-201ENSMUST00000116642 640 ntBASIC12.16□□□□□ -0.46
TP20293 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.16□□□□□ -0.46
TP20293 Gm8213-201ENSMUST00000118191 441 ntBASIC12.16□□□□□ -0.46
TP20293 Gm10156-201ENSMUST00000122364 462 ntBASIC12.16□□□□□ -0.46
TP20293 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.16□□□□□ -0.46
TP20293 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.16□□□□□ -0.46
TP20293 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.16□□□□□ -0.46
TP20293 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Gm8598-201ENSMUST00000221184 836 ntBASIC12.16□□□□□ -0.46
TP20293 Gm16372-201ENSMUST00000073088 450 ntBASIC12.16□□□□□ -0.46
TP20293 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.16□□□□□ -0.46
TP20293 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TP20293 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TP20293 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TP20293 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TP20293 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.15□□□□□ -0.46
TP20293 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.15□□□□□ -0.46
TP20293 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.15□□□□□ -0.46
TP20293 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.15□□□□□ -0.46
TP20293 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TP20293 Gm24196-201ENSMUST00000179161 110 ntBASIC12.15□□□□□ -0.46
TP20293 Gm5745-201ENSMUST00000183748 313 ntBASIC12.15□□□□□ -0.46
TP20293 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.15□□□□□ -0.46
TP20293 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.15□□□□□ -0.46
TP20293 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.15□□□□□ -0.46
TP20293 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.15□□□□□ -0.46
TP20293 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.15□□□□□ -0.46
TP20293 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.15□□□□□ -0.46
TP20293 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.15□□□□□ -0.46
TP20293 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms