Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd48P18181 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd48P18181 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd48P18181 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cd48P18181 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cd48P18181 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Cd48P18181 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.59□□□□□ -0.55
Cd48P18181 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.59□□□□□ -0.55
Cd48P18181 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.59□□□□□ -0.55
Cd48P18181 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cd48P18181 Gm42612-201ENSMUST00000197986 623 ntBASIC11.59□□□□□ -0.55
Cd48P18181 Gm43170-201ENSMUST00000199827 612 ntBASIC11.59□□□□□ -0.55
Cd48P18181 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.59□□□□□ -0.55
Cd48P18181 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd48P18181 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd48P18181 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cd48P18181 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cd48P18181 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd48P18181 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cd48P18181 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cd48P18181 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cd48P18181 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Cd48P18181 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cd48P18181 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd48P18181 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cd48P18181 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cd48P18181 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Cd48P18181 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cd48P18181 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cd48P18181 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.58□□□□□ -0.56
Cd48P18181 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cd48P18181 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.58□□□□□ -0.56
Cd48P18181 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.58□□□□□ -0.56
Cd48P18181 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.58□□□□□ -0.56
Cd48P18181 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.58□□□□□ -0.56
Cd48P18181 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.58□□□□□ -0.56
Cd48P18181 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Gm28631-201ENSMUST00000190740 334 ntBASIC11.58□□□□□ -0.56
Cd48P18181 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.58□□□□□ -0.56
Cd48P18181 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Cd48P18181 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.58□□□□□ -0.56
Cd48P18181 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.58□□□□□ -0.56
Cd48P18181 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Cd48P18181 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Cd48P18181 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.58□□□□□ -0.56
Cd48P18181 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cd48P18181 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms